Zimbra Collaboration Suite is an enterprise-class open source email, calendar and collaboration server. With the most innovative web application available today, Zimbra boosts the productivity of users on any desktop and dramatically reduces TCO compared to legacy platform vendors.
Other key advantages include advanced compatibility with existing desktop email clients, over-the-air sync to smart phones (iPhone, Android, BlackBerry) as well as better server scalability and more efficient administration.
This is an article that that I have written to highlight some of the areas which one can customize to give the server a better look and feel. Note that you should apply this in compliance with the Zimbra license depending on the version your are using.
a.) To change the favicon:
The favicon is usually located in /opt/zimbra/jetty/webapps/zimbra/img/logo. You will need to overwrite this with your own icon! Simple!